STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12796.1PFAM: DSBA oxidoreductase; KEGG: DsbA oxidoreductase. (231 aa)    
Predicted Functional Partners:
ADU12797.1
PFAM: DSBA oxidoreductase; KEGG: pzu:PHZ_c0580 probable disulfide isomerase.
 
    
0.764
ADU14634.1
PFAM: DSBA oxidoreductase; KEGG: cbg:CbuG_0020 outer membrane protein.
  
     0.716
ADU12406.1
PFAM: DSBA oxidoreductase; KEGG: bmr:BMI_I371 twin-arginine translocation signal domain protein.
  
     0.677
ADU12798.1
PFAM: protein of unknown function DUF721; KEGG: cak:Caul_4370 hypothetical protein.
 
     0.619
ADU12660.1
PFAM: Disulphide bond formation protein DsbB; KEGG: cak:Caul_3197 hypothetical protein.
 
 
 0.599
ADU14883.1
KEGG: cytochrome c biogenesis protein transmembrane region.
  
 
 0.582
ADU13374.1
PFAM: protein of unknown function DUF1013; KEGG: hypothetical protein.
  
     0.519
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
    0.512
ADU13954.1
Helix-turn-helix domain protein; KEGG: cak:Caul_5225 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.498
ADU11872.1
Helix-turn-helix domain protein; KEGG: cak:Caul_0026 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.448
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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