STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12845.1KEGG: amc:MADE_03342 hypothetical protein. (157 aa)    
Predicted Functional Partners:
ADU12846.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: tgr:Tgr7_1398 short-chain dehydrogenase/reductase SDR.
 
     0.909
ADU13214.1
KEGG: mpt:Mpe_A0231 putative lipoprotein.
 
   
 0.785
ADU13537.1
Methyltransferase; KEGG: pzu:PHZ_c1906 hypothetical protein; TIGRFAM: methyltransferase; PFAM: Protein of unknown function DUF2260; protein of unknown function DUF323.
  
  
 0.672
ADU13078.1
PFAM: protein of unknown function DUF1365; KEGG: azc:AZC_2437 hypothetical protein.
 
     0.462
ADU13077.1
PFAM: amine oxidase; KEGG: avi:Avi_0088 amine oxidase flavin-containing.
 
     0.453
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.