STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12857.1KEGG: rru:Rru_A3032 hypothetical protein. (118 aa)    
Predicted Functional Partners:
rlmJ
Protein of unknown function DUF519; Specifically methylates the adenine in position 2030 of 23S rRNA.
       0.777
ADU12856.1
PFAM: protein of unknown function DUF805; KEGG: hypothetical protein.
       0.586
ADU12855.1
Von Willebrand factor type A; KEGG: mmr:Mmar10_2602 Flp pilus assembly protein TadG; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A.
 
     0.522
ADU12859.1
KEGG: stl:stu0442 glucan-binding protein B, putative.
       0.511
ADU12854.1
Von Willebrand factor type A; KEGG: bbt:BBta_4775 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A.
 
     0.447
ADU12125.1
PFAM: TadE family protein; KEGG: cak:Caul_4199 hypothetical protein.
  
     0.424
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.