STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12878.1KEGG: mmr:Mmar10_1301 hypothetical protein. (224 aa)    
Predicted Functional Partners:
ADU12875.1
SMART: helix-turn-helix domain protein; KEGG: rpe:RPE_4746 XRE family transcriptional regulator.
       0.596
ADU12876.1
Hypothetical protein; KEGG: bpu:BPUM_1139 major facilitator transporter.
       0.596
ADU12877.1
KEGG: ccs:CCNA_03390 hypothetical protein.
       0.596
ADU12879.1
PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: swi:Swit_2489 peptidyl-prolyl cis-trans isomerase, cyclophilin type.
       0.533
ADU12874.1
PFAM: GumN family protein; KEGG: ccs:CCNA_03815 GumN superfamily protein.
       0.459
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.