STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12910.1KEGG: nitrate ABC transporter inner membrane subunit; TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component. (302 aa)    
Predicted Functional Partners:
ADU12909.1
TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; KEGG: ccs:CCNA_00647 nitrate transport ATP-binding protein NrtD; SMART: AAA ATPase.
 
 0.999
ADU12911.1
KEGG: ccs:CCNA_00645 nitrate binding protein NrtA.
 
 0.998
ADU14246.1
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: pzu:PHZ_c0971 nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.975
ADU14243.1
KEGG: aeh:Mlg_1703 nitrate transporter.
  
 0.932
ADU12997.1
KEGG: pen:PSEEN3429 hypothetical protein.
  
  
 0.702
ADU12912.1
Manually curated; KEGG: hypothetical protein.
       0.630
ADU12105.1
PFAM: 2OG-Fe(II) oxygenase; KEGG: cak:Caul_0182 2OG-Fe(II) oxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
 
    0.480
ADU14113.1
PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: hba:Hbal_2547 taurine catabolism dioxygenase TauD/TfdA.
  
  
 0.471
ADU14242.1
PFAM: ANTAR domain protein; KEGG: pzu:PHZ_c0966 response regulator NasT.
 
   
 0.449
ADU13948.1
KEGG: bbr:BB0494 hypothetical protein.
  
  
 0.425
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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