STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12932.1KEGG: ccs:CCNA_01373 hypothetical protein. (260 aa)    
Predicted Functional Partners:
ADU13531.1
PFAM: protein of unknown function DUF1508; KEGG: ccs:CCNA_03060 hypothetical protein.
  
   0.979
ADU11843.1
KEGG: cak:Caul_5022 hypothetical protein.
   
    0.676
ADU13730.1
PFAM: NADPH-dependent FMN reductase; KEGG: bcj:BCAS0502 putative flavodoxin protein.
   
  
 0.602
ADU12931.1
PFAM: Conserved hypothetical protein CHP00730; KEGG: hypothetical protein; Belongs to the LOG family.
       0.559
ADU12543.1
PFAM: Ferritin Dps family protein; KEGG: cak:Caul_4306 ferritin Dps family protein; Belongs to the Dps family.
   
  
 0.522
ADU14165.1
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
  
 0.491
clpS
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
       0.426
ADU12930.1
KEGG: nve:NEMVE_v1g174 hypothetical protein.
       0.401
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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