STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU12991.1PFAM: glycosyl transferase family 2; polysaccharide deacetylase; glycoside hydrolase family 18; KEGG: nar:Saro_1595 polysaccharide deacetylase. (1126 aa)    
Predicted Functional Partners:
ADU14747.1
SMART: Tetratricopeptide repeat; KEGG: ccs:CCNA_01524 FlbA protein.
  
 
 0.820
ADU13646.1
PFAM: polysaccharide deacetylase; KEGG: azc:AZC_2836 polysaccharide deacetylase.
 
  
0.756
ADU12434.1
PFAM: Creatininase; KEGG: ccs:CCNA_03693 creatinine amidohydrolase family protein.
  
  
 0.750
ADU12260.1
Hypothetical protein; KEGG: swi:Swit_1380 tetratricopeptide TPR_4.
  
 
 0.723
ADU13879.1
TIGRFAM: nucleotide sugar dehydrogenase; KEGG: vha:VIBHAR_00706 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation.
  
  
 0.723
ADU12976.1
PFAM: Tetratricopeptide TPR_1 repeat-containing protein; sulfotransferase; KEGG: mmr:Mmar10_1051 sulfotransferase.
  
 
 0.720
ADU13099.1
KEGG: pzu:PHZ_c0921 hypothetical protein.
  
 
 0.720
ADU13821.1
Hypothetical protein; KEGG: sus:Acid_5288 TPR repeat-containing protein.
  
 
 0.720
ADU13929.1
Hypothetical protein; KEGG: cbt:CLH_3206 CpsP.
  
 
 0.699
ADU14177.1
TIGRFAM: urate catabolism protein; KEGG: xcb:XC_0292 hypothetical protein; PFAM: polysaccharide deacetylase.
  
  
 0.698
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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