STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU13050.1KEGG: ote:Oter_4196 hypothetical protein. (391 aa)    
Predicted Functional Partners:
ADU14252.1
Pectate lyase; KEGG: hba:Hbal_2827 pectate lyase; TIGRFAM: pectate lyase; PFAM: Pectic acid lyase.
  
     0.755
ADU12988.1
Pectate lyase; KEGG: dze:Dd1591_1434 pectate lyase; TIGRFAM: pectate lyase; PFAM: Pectic acid lyase.
  
     0.750
ADU15052.1
PFAM: Pectinesterase; KEGG: hba:Hbal_2622 pectinesterase.
  
     0.736
ADU13055.1
KEGG: TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor.
 
     0.731
ADU14926.1
PFAM: Pectic acid lyase; KEGG: ccs:CCNA_02115 secreted pectate lyase-family protein.
  
     0.724
ADU14969.1
KEGG: TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
  
     0.724
ADU13053.1
PFAM: lipolytic protein G-D-S-L family; KEGG: xcb:XC_0151 hypothetical protein.
 
     0.714
ADU13080.1
PFAM: Glycoside hydrolase family 42 domain protein; KEGG: cak:Caul_1291 glycoside hydrolase family protein.
 
 0.703
ADU12065.1
KEGG: TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor.
  
     0.694
ADU12776.1
KEGG: xcb:XC_0124 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor.
  
     0.666
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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