STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU13157.1PFAM: integrase family protein; KEGG: mmr:Mmar10_2345 putative site-specific recombinase, phage integrase family protein; Belongs to the 'phage' integrase family. (425 aa)    
Predicted Functional Partners:
ADU14866.1
PFAM: Prephenate dehydrogenase; KEGG: oan:Oant_3943 prephenate dehydrogenase.
  
    0.494
ADU12454.1
PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like; KEGG: mmr:Mmar10_2026 hypothetical protein.
  
     0.488
ADU12234.1
KEGG: putative ATPase, AAA family; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase.
  
     0.468
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.448
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
  
  
 0.431
ADU14964.1
KEGG: smd:Smed_1412 hypothetical protein.
  
     0.428
ADU12838.1
KEGG: hba:Hbal_0817 hypothetical protein.
  
     0.420
ADU14258.1
Hypothetical protein; KEGG: cak:Caul_4512 TonB-dependent receptor plug.
  
     0.412
ADU13158.1
PFAM: peptidase M28; KEGG: ccs:CCNA_02627 aminopeptidase.
     
 0.405
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.