STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU13205.1PFAM: Biopolymer transport protein ExbD/TolR; KEGG: cak:Caul_3580 biopolymer transport protein ExbD/TolR. (145 aa)    
Predicted Functional Partners:
ADU13206.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: MotA/TolQ/ExbB proton channel.
 
 
 0.990
ADU13349.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: pzu:PHZ_c3089 MotA/TolQ/ExbB proton channel family protein.
 
 
 0.953
ADU13204.1
TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.917
ADU12986.1
KEGG: pzu:PHZ_c2205 hypothetical protein.
  
 
 0.769
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 
 0.752
ADU13203.1
PFAM: TonB domain; KEGG: TonB family protein.
  
 
 0.738
ADU12962.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.670
bamA
Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.644
ADU13347.1
TolA protein; KEGG: ccs:CCNA_03339 TolA protein.
  
 
 0.631
ADU12554.1
KEGG: rce:RC1_3835 protein TonB; TIGRFAM: TonB family protein; PFAM: TonB domain.
  
 
 0.625
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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