STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU13348.1KEGG: protein TolR; TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR. (160 aa)    
Predicted Functional Partners:
ADU13349.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: pzu:PHZ_c3089 MotA/TolQ/ExbB proton channel family protein.
 
 
 0.989
ADU13206.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: MotA/TolQ/ExbB proton channel.
 
 
 0.953
tolB
Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
  
 0.925
ADU13347.1
TolA protein; KEGG: ccs:CCNA_03339 TolA protein.
  
 
 0.913
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 
 0.861
ADU12986.1
KEGG: pzu:PHZ_c2205 hypothetical protein.
  
 
 0.769
bamA
Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.706
ADU12962.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.675
ADU12554.1
KEGG: rce:RC1_3835 protein TonB; TIGRFAM: TonB family protein; PFAM: TonB domain.
  
 
 0.625
ADU14048.1
KEGG: azl:AZL_d01940 TonB protein; TIGRFAM: TonB family protein; PFAM: TonB domain.
  
 
 0.625
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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