STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU13366.1KEGG: pap:PSPA7_0575 hypothetical protein. (274 aa)    
Predicted Functional Partners:
ADU14557.1
Transketolase central region protein; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.971
ADU13367.1
PFAM: thioesterase superfamily protein; KEGG: phe:Phep_1366 thioesterase superfamily protein.
       0.762
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.658
ADU15111.1
KEGG: swi:Swit_1806 hypothetical protein.
  
   0.658
ADU13314.1
KEGG: pzu:PHZ_c2685 hypothetical protein.
    
 0.568
ADU14864.1
Hypothetical protein; KEGG: rru:Rru_A2864 signal transduction protein.
    
 0.568
ADU12734.1
Major intrinsic protein; KEGG: ccs:CCNA_01572 aquaporin/glycerol uptake facilitator protein; manually curated; PFAM: major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.540
ADU13122.1
KEGG: rsk:RSKD131_4384 hypothetical protein.
    
   0.540
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
 0.531
ADU11720.1
Sun protein; KEGG: cak:Caul_4779 Fmu (Sun) domain-containing protein; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.528
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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