STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU13517.1KEGG: cak:Caul_3395 heat shock protein DnaJ domain-containing protein. (225 aa)    
Predicted Functional Partners:
ADU13427.1
PFAM: nitrogen-fixing NifU domain protein; KEGG: pzu:PHZ_c0421 NifU-like protein involved in Fe-S cluster formation.
  
 
 0.991
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.835
ADU12505.1
PFAM: Heat shock protein 70; KEGG: rce:RC1_2556 heat shock protein DnaK, putative.
  
 
 0.774
ADU14399.1
Cysteine desulfurase; KEGG: cak:Caul_2587 aminotransferase class V; PFAM: aminotransferase class V.
  
 
 0.772
ADU14187.1
KEGG: cak:Caul_3125 iron-sulfur cluster assembly accessory protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; Belongs to the HesB/IscA family.
  
 
 0.737
ADU14406.1
KEGG: iron-sulfur cluster assembly accessory protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; Belongs to the HesB/IscA family.
  
 
 0.737
ADU12427.1
PFAM: HemY domain protein; KEGG: cak:Caul_0121 HemY domain-containing protein.
  
     0.668
ADU13259.1
Helix-turn-helix domain protein; KEGG: ccs:CCNA_02334 transcriptional regulator of stalk biogenesis StaR; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.551
ADU13179.1
PFAM: O-antigen polymerase; KEGG: cak:Caul_3543 O-antigen polymerase.
 
     0.529
ADU13104.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.527
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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