STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU13551.1PFAM: ROK family protein; KEGG: cak:Caul_2135 ROK family protein. (410 aa)    
Predicted Functional Partners:
ADU13554.1
PFAM: ROK family protein; KEGG: cak:Caul_0150 ROK family protein.
 
     0.597
ADU13360.1
KEGG: GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH.
 
  
 0.567
ADU14369.1
KEGG: ccs:CCNA_00570 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH.
 
  
 0.525
ADU13364.1
TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase.
 
  
 0.475
ADU13040.1
PFAM: ROK family protein; KEGG: ROK family protein.
 
     0.421
ADU13752.1
KEGG: glutamate synthase; PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase; glutamate synthase alpha subunit domain protein; glutamine amidotransferase class-II.
  
  
 0.420
ADU13550.1
Hypothetical protein; KEGG: sbp:Sbal223_1208 putative ABC transporter ATP-binding protein.
       0.414
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.