STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU13557.1KEGG: cak:Caul_1290 tryptophan halogenase. (507 aa)    
Predicted Functional Partners:
ADU13558.1
KEGG: cak:Caul_1289 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
 
     0.820
ADU13556.1
KEGG: nar:Saro_1882 tryptophan halogenase.
 
    
0.787
ADU13649.1
KEGG: TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
  
     0.753
ADU12389.1
SMART: transcription factor jumonji jmjC domain-containing protein; KEGG: cak:Caul_1852 transcription factor jumonji domain-containing protein.
 
     0.709
ADU12388.1
PFAM: SapC family protein; KEGG: cak:Caul_1851 SapC family protein.
 
     0.705
ADU15014.1
SMART: transcription factor jumonji jmjC domain-containing protein; KEGG: transcription factor jumonji JmjC domain-containing protein.
 
     0.704
ADU12387.1
KEGG: ccs:CCNA_01051 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor.
  
     0.698
ADU12905.1
SMART: transcription factor jumonji jmjC domain-containing protein; KEGG: transcription factor jumonji JmjC domain-containing protein.
 
     0.697
ADU15019.1
SMART: transcription factor jumonji jmjC domain-containing protein; KEGG: xop:PXO_02803 PASs1 domain protein.
 
     0.692
ADU15018.1
KEGG: mmr:Mmar10_2720 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
  
     0.690
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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