STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU13640.1KEGG: xfa:XF1814 hypothetical protein. (658 aa)    
Predicted Functional Partners:
ADU13639.1
KEGG: cja:CJA_0729 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI.
       0.623
ADU12556.1
PFAM: glycosyl transferase family 39; KEGG: ccs:CCNA_00209 undecaprenyl-phosphomannose:protein mannosyltransferase.
  
     0.602
ADU14767.1
PFAM: glycosyl transferase family 2; GtrA family protein; KEGG: xau:Xaut_3310 dolichyl-phosphate beta-D-mannosyltransferase.
 
  
 0.505
ADU13641.1
KEGG: hba:Hbal_0580 L-serine dehydratase 1; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; Belongs to the iron-sulfur dependent L-serine dehydratase family.
       0.503
ADU13600.1
FeoA family protein; KEGG: xac:XAC1854 ferrous iron transport protein; PFAM: FeoA family protein; SMART: FeoA family protein.
  
     0.460
ADU12991.1
PFAM: glycosyl transferase family 2; polysaccharide deacetylase; glycoside hydrolase family 18; KEGG: nar:Saro_1595 polysaccharide deacetylase.
  
  
 0.430
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.