STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU13678.1KEGG: ccs:CCNA_02850 cytochrome c-type biogenesis protein CcmI. (354 aa)    
Predicted Functional Partners:
ADU13676.1
PFAM: cytochrome c assembly protein; KEGG: pzu:PHZ_c2691 cytochrome c-type biogenesis protein CycK.
  
 
 0.918
ADU13675.1
Cytochrome C biogenesis protein; Possible subunit of a heme lyase.
  
  
 0.806
ADU12135.1
Periplasmic protein thiol/disulfide oxidoreductase DsbE; KEGG: ccs:CCNA_03788 thiol:disulfide interchange protein TlpA; TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein.
  
  
 0.720
ccmE
CcmE/CycJ protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.
 
  
 0.719
ADU13679.1
KEGG: pzu:PHZ_c2694 hypothetical protein.
       0.629
ADU14569.1
PFAM: Ubiquinol-cytochrome c chaperone/UPF0174; KEGG: ubiquinol-cytochrome c reductase chaperone.
  
     0.560
ADU12927.1
PFAM: Flagellar assembly regulator FliX, class II; KEGG: ccs:CCNA_02664 flagellar assembly regulator FliX.
  
     0.523
ADU13680.1
Integral membrane sensor signal transduction histidine kinase; KEGG: ccs:CCNA_02853 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein.
       0.504
ADU12304.1
PFAM: Protein of unknown function DUF2328; KEGG: ccs:CCNA_03584 histidine phosphotransferase ChpT.
  
     0.495
ADU12279.1
PFAM: protein of unknown function DUF1153; KEGG: hypothetical protein.
  
     0.485
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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