STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU13820.1TIGRFAM: transcriptional regulator, y4mF family; PFAM: helix-turn-helix domain protein; KEGG: ccs:CCNA_02822 transcriptional regulator, MerR family; SMART: helix-turn-helix domain protein. (208 aa)    
Predicted Functional Partners:
ADU13819.1
HipA N-terminal domain protein; KEGG: ccs:CCNA_02821 HipA-related phosphatidylinositol 3/4-kinase; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein.
 
 
 0.983
ADU13811.1
KEGG: rlg:Rleg_6813 HipA N-terminal domain protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein.
 
 
 0.846
ADU11734.1
KEGG: aca:ACP_1546 HipA family protein; manually curated; PFAM: HipA domain protein.
 
 
 0.604
ADU14025.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: TonB-dependent receptor.
  
     0.405
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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