STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU13846.1Capsular exopolysaccharide family; KEGG: ccs:CCNA_00163 chain length regulator/tyrosine-protein kinase (capsular polysaccharide biosynthesis); TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein. (721 aa)    
Predicted Functional Partners:
ADU13844.1
PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: pzu:PHZ_c2166 periplasmic protein involved in polysaccharide export.
 
 
 0.998
ADU14790.1
KEGG: ccr:CC_2425 HfsE; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.996
ADU14797.1
PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: mmr:Mmar10_1691 polysaccharide export protein.
 
 
 0.992
ADU13845.1
KEGG: ccs:CCNA_00162 hypothetical protein.
 
   
 0.951
ADU13839.1
Undecaprenyl-phosphate galactose phosphotransferase; KEGG: sugar transferase; PFAM: sugar transferase.
 
  
 0.932
ADU13876.1
KEGG: cak:Caul_4820 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase.
 
  
 0.932
ADU13847.1
PFAM: polysaccharide biosynthesis protein; KEGG: mpo:Mpop_3544 polysaccharide biosynthesis protein.
 
  
 0.882
ADU12607.1
PFAM: polysaccharide biosynthesis protein CapD; KEGG: pzu:PHZ_c2231 UDP-D-quinovosamine 4-dehydrogenase.
 
  
 0.824
ADU12109.1
KEGG: UDP-N-acetylglucosamine 4,6-dehydratase; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase; PFAM: polysaccharide biosynthesis protein CapD.
  
  
 0.794
ADU13851.1
PFAM: O-antigen polymerase; KEGG: rsk:RSKD131_4165 O-antigen polymerase.
 
  
 0.773
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.