STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU13858.1PFAM: IS66 Orf2 family protein; KEGG: ret:RHE_PA00099 putative insertion sequence transposase protein. (131 aa)    
Predicted Functional Partners:
ADU13857.1
KEGG: smd:Smed_6513 transposase IS66.
 
     0.929
ADU13852.1
KEGG: rhi:NGR_b22420 putative transposase number 3 for disrupted insertion sequence NGRIS-6a.
 
     0.847
ADU14687.1
KEGG: rhi:NGR_b22420 putative transposase number 3 for disrupted insertion sequence NGRIS-6a.
 
     0.778
ADU14869.1
KEGG: smd:Smed_6513 transposase IS66.
 
     0.778
ADU13856.1
Hypothetical protein; Manually curated; KEGG: smd:Smed_6514 hypothetical protein.
       0.693
ADU11951.1
PFAM: transposase IS3/IS911 family protein; KEGG: ret:RHE_PA00100 putative insertion sequence transposase protein.
 
     0.538
ADU14867.1
PFAM: transposase IS3/IS911 family protein; KEGG: ret:RHE_PA00100 putative insertion sequence transposase protein.
 
     0.538
ADU13853.1
PFAM: IS66 Orf2 family protein; KEGG: ret:RHE_PD00346 insertion sequence transposase protein.
 
    
0.500
ADU13854.1
PFAM: transposase IS3/IS911 family protein; KEGG: rle:pRL70047A putative insertion sequence protein.
       0.442
ADU13859.1
KEGG: sal:Sala_0397 transposase IS3/IS911; manually curated; PFAM: transposase IS3/IS911 family protein.
 
     0.430
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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