STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU13944.1KEGG: rhi:NGR_c30520 mannose-6-phosphate isomerase; PFAM: N-acylglucosamine 2-epimerase. (386 aa)    
Predicted Functional Partners:
ADU13882.1
KEGG: azl:AZL_f01870 mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.911
ADU13934.1
Manually curated; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: cak:Caul_4933 histidinol-phosphate phosphatase family protein; PFAM: Nucleotidyl transferase.
      0.619
cysQ
3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.
       0.594
ADU13945.1
KEGG: cak:Caul_4900 hypothetical protein.
       0.572
ADU13946.1
KEGG: cak:Caul_4901 hypothetical protein.
       0.572
ADU14020.1
PFAM: Conserved hypothetical protein FYDLN acid; KEGG: ccs:CCNA_03705 hypothetical protein.
  
     0.493
ADU11780.1
KEGG: pzu:PHZ_c0205 acyltransferase family protein; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase.
  
    0.479
ADU12519.1
KEGG: family 39 glycosyl transferase.
  
     0.477
ADU12833.1
PFAM: protein of unknown function DUF526; KEGG: pzu:PHZ_c2857 hypothetical protein.
  
     0.473
ADU13312.1
PFAM: methyltransferase small; KEGG: xac:XAC3679 ribosomal RNA small subunit methyltransferase C; Belongs to the methyltransferase superfamily.
  
     0.459
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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