STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU13957.1Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (206 aa)    
Predicted Functional Partners:
ADU12921.1
KEGG: hba:Hbal_0921 carbonate dehydratase; PFAM: carbonic anhydrase.
     
 0.925
ADU13237.1
KEGG: vap:Vapar_3452 hypothetical protein.
    
 
 0.832
ADU13956.1
Hypothetical protein; KEGG: bra:BRADO2561 putative sensory transducer protein.
       0.572
cysC
Sulfate adenylyltransferase, large subunit; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.502
ADU11740.1
PFAM: phosphate acetyl/butaryl transferase; malic protein NAD-binding; malic protein domain protein; KEGG: ccs:CCNA_03663 NADP-dependent malic enzyme.
 
   
 0.498
ADU13958.1
PFAM: glycosyl transferase family 2; KEGG: bbt:BBta_1026 hypothetical protein.
       0.480
ADU13955.1
KEGG: bifunctional NMN adenylyltransferase/NUDIX hydrolase; PFAM: NUDIX hydrolase; Belongs to the Nudix hydrolase family.
       0.420
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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