STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU13972.1KEGG: rpe:RPE_3056 hypothetical protein. (182 aa)    
Predicted Functional Partners:
ADU13971.1
KEGG: cak:Caul_0241 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1.
       0.610
ADU13973.1
Two component transcriptional regulator PhoB, winged helix family; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: ccs:CCNA_00296 phosphate regulon response regulator PhoB; SMART: response regulator receiver; transcriptional regulator domain-containing protein.
       0.522
ADU13974.1
Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
       0.494
ADU13970.1
Thioredoxin; KEGG: pzu:PHZ_c0019 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein.
       0.446
ADU13969.1
PFAM: protein of unknown function DUF343; KEGG: acr:Acry_2125 hypothetical protein; Belongs to the UPF0434 family.
       0.443
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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