STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU14049.1KEGG: pha:PSHAa2702 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase. (358 aa)    
Predicted Functional Partners:
ADU14050.1
PFAM: Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: rce:RC1_3839 TonB dependent receptor, putative.
 
    0.864
ADU14048.1
KEGG: azl:AZL_d01940 TonB protein; TIGRFAM: TonB family protein; PFAM: TonB domain.
 
     0.813
ADU12270.1
KEGG: sus:Acid_2173 hypothetical protein.
  
 
 0.762
ADU12725.1
KEGG: ava:Ava_B0146 hypothetical protein.
 
     0.656
ADU14051.1
Hypothetical protein; KEGG: rpi:Rpic_2059 porin gram-negative type.
       0.527
ADU12057.1
KEGG: hypothetical protein.
 
   0.519
ADU13862.1
KEGG: rce:RC1_2570 hypothetical protein.
 
   0.445
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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