STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU14057.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ara:Arad_8737 transcriptional regulator protein. (413 aa)    
Predicted Functional Partners:
ADU14056.1
PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; Extradiol ring-cleavage dioxygenase LigAB LigA subunit; KEGG: ppf:Pput_3200 protocatechuate 4,5-dioxygenase.
 
     0.877
ADU14059.1
KEGG: pat:Patl_3890 hypothetical protein; TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase.
  
     0.764
ADU14060.1
PFAM: protein of unknown function DUF453; KEGG: pat:Patl_3889 hypothetical protein.
  
    0.761
ADU14061.1
PFAM: Phosphogluconate dehydrogenase, NAD-binding, putative-like; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rpe:RPE_0748 putative dehydrogenase.
  
     0.758
ADU14062.1
PFAM: amidohydrolase 2; KEGG: xca:xccb100_4227 putative 4-oxalomesaconate hydratase.
  
     0.730
ADU13689.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sjp:SJA_C1-23900 LysR-family transcriptional regulator.
  
     0.697
ADU12939.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: tau:Tola_1238 transcriptional regulator, LysR family.
  
     0.617
ADU13034.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rpb:RPB_3829 LysR family transcriptional regulator.
  
     0.554
ADU14055.1
PFAM: major facilitator superfamily MFS_1; KEGG: hba:Hbal_2570 major facilitator superfamily MFS_1.
 
    0.541
ADU13752.1
KEGG: glutamate synthase; PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase; glutamate synthase alpha subunit domain protein; glutamine amidotransferase class-II.
  
  
 0.498
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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