STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU14074.1PFAM: beta-lactamase; KEGG: kko:Kkor_1755 beta-lactamase. (363 aa)    
Predicted Functional Partners:
ADU14075.1
KEGG: she:Shewmr4_1913 hypothetical protein.
     0.937
ADU13414.1
PFAM: beta-lactamase; KEGG: ccs:CCNA_02190 penicillin-binding protein.
  
     0.769
ADU13966.1
PFAM: beta-lactamase; KEGG: mmr:Mmar10_2357 beta-lactamase.
  
     0.755
ADU12248.1
PFAM: beta-lactamase; Peptidase S12, Pab87-related-like; KEGG: beta-lactamase.
  
     0.570
ADU14073.1
KEGG: aba:Acid345_2449 hypothetical protein.
       0.458
ADU12078.1
PFAM: beta-lactamase; KEGG: cak:Caul_4621 beta-lactamase.
  
     0.422
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.