STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU14076.1PFAM: amidohydrolase 2; KEGG: ccs:CCNA_03283 putative metal-dependent hydrolase. (346 aa)    
Predicted Functional Partners:
ADU12837.1
KEGG: ccs:CCNA_01047 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
  
     0.714
ADU13004.1
PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: eli:ELI_03230 hypothetical protein.
  
     0.655
ADU14218.1
KEGG: jan:Jann_1684 hypothetical protein.
  
     0.655
ADU15154.1
KEGG: ccs:CCNA_03621 transcriptional regulator, AraC family.
  
     0.584
ADU12624.1
KEGG: ccs:CCNA_01302 hypothetical protein.
  
     0.534
ADU11799.1
KEGG: ccs:CCNA_01302 hypothetical protein.
  
     0.533
ADU14222.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_3415 TonB-dependent receptor.
  
     0.512
ADU13836.1
PFAM: protein of unknown function DUF1501; KEGG: ccs:CCNA_02496 hypothetical protein.
  
     0.506
ADU15118.1
KEGG: ccs:CCNA_00970 long-chain-fatty-acid--CoA ligase.
  
     0.494
ADU12557.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_4698 TonB-dependent receptor.
  
     0.483
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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