STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU14090.1PFAM: transposase IS4 family protein; KEGG: mpo:Mpop_4643 transposase IS4 family protein. (448 aa)    
Predicted Functional Partners:
ADU11778.1
PFAM: transposase IS116/IS110/IS902 family protein; KEGG: nwi:Nwi_0853 transposase IS116/IS110/IS902.
  
   
 0.546
ADU14108.1
PFAM: transposase IS116/IS110/IS902 family protein; KEGG: nwi:Nwi_0853 transposase IS116/IS110/IS902.
  
   
 0.546
ADU13093.1
PFAM: transposase IS116/IS110/IS902 family protein; KEGG: bbt:BBta_5311 transposase.
  
   
 0.533
ADU14089.1
PFAM: transposase IS116/IS110/IS902 family protein; KEGG: bbt:BBta_5311 transposase.
  
   
 0.533
ADU14091.1
KEGG: rpc:RPC_3939 transposase, mutator type; manually curated; PFAM: transposase mutator type.
       0.470
ADU14042.1
Transposase IS66; Manually curated; KEGG: rru:Rru_A2278 transposase IS66.
  
     0.408
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.