STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU14133.1PFAM: Conjugal transfer protein TrbC; KEGG: pla:Plav_1836 conjugal transfer protein TrbC. (119 aa)    
Predicted Functional Partners:
ADU14135.1
KEGG: pla:Plav_1838 conjugal transfer ATPase TrbE; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; SMART: AAA ATPase.
 
 
 0.965
ADU14134.1
PFAM: type IV secretory pathway VirB3 family protein; KEGG: sjp:SJA_C1-29680 conjugal transfer protein TrbD.
 
   
 0.951
ADU14131.1
KEGG: cak:Caul_2026 CopG/DNA-binding domain-containing protein.
 
     0.950
ADU14130.1
PFAM: TRAG family protein; KEGG: pla:Plav_1833 conjugal transfer coupling protein TraG.
 
   
 0.949
ADU14132.1
KEGG: pla:Plav_1835 P-type conjugative transfer ATPase TrbB; TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E.
   
 0.929
ADU14136.1
TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: pla:Plav_1839 conjugal transfer protein TrbJ.
 
   
 0.897
ADU14138.1
KEGG: mlo:mlr6403 conjugal transfer protein TrbF.
 
   
 0.884
ADU14137.1
KEGG: mlo:mlr6402 conjugal transfer protein TrbL; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein.
 
   
 0.882
ADU14139.1
KEGG: cak:Caul_2034 P-type conjugative transfer protein TrbG; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX.
 
   
 0.879
ADU14140.1
PFAM: conjugation TrbI family protein; KEGG: mlo:mlr6405 conjugal transfer protein TrbI.
 
   
 0.872
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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