STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU14171.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: azl:AZL_c04930 transcriptional regulator. (299 aa)    
Predicted Functional Partners:
ADU12939.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: tau:Tola_1238 transcriptional regulator, LysR family.
  
     0.720
ADU13689.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sjp:SJA_C1-23900 LysR-family transcriptional regulator.
  
     0.705
ADU13968.1
PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: LysR family transcriptional regulator.
  
     0.615
ADU14177.1
TIGRFAM: urate catabolism protein; KEGG: xcb:XC_0292 hypothetical protein; PFAM: polysaccharide deacetylase.
   
   0.553
ADU14175.1
TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: xac:XAC0301 allantoate amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein.
   
 
 0.549
ADU14178.1
KEGG: xcv:XCV0306 hypothetical protein.
  
    0.532
ADU14172.1
KEGG: mpo:Mpop_1124 hypothetical protein.
       0.531
ADU14173.1
Amidohydrolase, AtzE family; KEGG: xac:XAC0306 amidase; TIGRFAM: amidohydrolase, AtzE family; PFAM: Amidase.
       0.531
ADU14174.1
Gamma-glutamyltransferase; KEGG: xac:XAC0305 gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase.
       0.531
ADU14176.1
PFAM: aminotransferase class V; KEGG: xac:XAC0300 serine-pyruvate aminotransferase.
       0.531
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.