STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU14321.1Hypothetical protein; KEGG: hsa:25839 component of oligomeric golgi complex 4. (206 aa)    
Predicted Functional Partners:
ADU14319.1
KEGG: cho:Chro.80501 hypothetical protein.
       0.773
ADU14320.1
PFAM: protein of unknown function DUF159; KEGG: hne:HNE_1375 hypothetical protein.
       0.773
ADU14318.1
KEGG: atc:AGR_L_3376 hypothetical protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein.
       0.608
ADU14322.1
KEGG: bfo:BRAFLDRAFT_73297 hypothetical protein.
       0.598
ADU14323.1
Transglutaminase domain protein; KEGG: rru:Rru_A2753 transglutaminase-like; PFAM: transglutaminase domain protein; transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein.
       0.565
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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