STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU14459.1KEGG: poly(R)-hydroxyalkanoic acid synthase, class I; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold. (677 aa)    
Predicted Functional Partners:
ADU11923.1
KEGG: cak:Caul_4653 polyhydroxyalkanoate depolymerase, intracellular; TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein.
 
  
 0.984
ADU12525.1
KEGG: pzu:PHZ_c0432 acetoacetyl-CoA reductase; TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR.
 
 
 0.959
ADU15125.1
PFAM: MaoC domain protein dehydratase; KEGG: pzu:PHZ_c3159 MaoC family protein/phosphate acetyl/butaryl transferase.
 
 
 0.959
ADU12757.1
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; Enoyl-CoA hydratase/isomerase; KEGG: ccs:CCNA_00074 multifunctional fatty acid oxidation complex subunit alpha FadJ.
   
 
 0.938
ADU12523.1
Polyhydroxyalkonate synthesis repressor, PhaR; KEGG: ccs:CCNA_00543 methyl-accepting chemotaxis protein; TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHA accumulation regulator DNA-binding protein; PHB accumulation regulatory domain protein.
 
   
 0.851
ADU13540.1
PFAM: Protein of unknown function DUF3734; Patatin; KEGG: ara:Arad_0198 patatin.
 
   
 0.726
ADU14688.1
Phasin family protein; KEGG: pzu:PHZ_c1297 hypothetical protein; TIGRFAM: phasin family protein; PFAM: Phasin.
 
  
 0.625
ADU14461.1
TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: pzu:PHZ_c1642 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein.
       0.525
ADU14462.1
KEGG: single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1.
       0.524
ADU11740.1
PFAM: phosphate acetyl/butaryl transferase; malic protein NAD-binding; malic protein domain protein; KEGG: ccs:CCNA_03663 NADP-dependent malic enzyme.
  
  
 0.522
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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