STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU14552.1PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_03615 TonB dependent receptor. (691 aa)    
Predicted Functional Partners:
ADU14553.1
KEGG: psl:Psta_1905 PepSY-associated TM helix domain protein.
       0.784
ADU12587.1
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: ccs:CCNA_00214 TonB-dependent receptor.
  
   
 0.705
ADU14087.1
PFAM: FecR protein; KEGG: cak:Caul_4078 anti-FecI sigma factor, FecR.
 
    0.646
ADU12964.1
KEGG: hne:HNE_2116 TonB-dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
  
  
 0.616
ADU14046.1
PFAM: FecR protein; KEGG: anti-FecI sigma factor FecR.
 
    0.616
ADU14052.1
anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: pag:PLES_16521 putative transmembrane sensor.
 
    0.614
ADU13889.1
PFAM: FecR protein; KEGG: anti-FecI sigma factor FecR.
 
    0.610
ADU13057.1
anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: rru:Rru_A1439 putative FecR.
 
    0.607
ADU13047.1
PFAM: FecR protein; KEGG: anti-FecI sigma factor FecR.
 
    0.593
ADU15055.1
PFAM: FecR protein; KEGG: anti-FecI sigma factor FecR.
 
    0.590
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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