STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU14757.1KEGG: rce:RC1_0950 AmpG protein, putative. (431 aa)    
Predicted Functional Partners:
ADU11741.1
PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily protein.
  
  
 
0.920
ADU14758.1
KEGG: bja:bll7858 hypothetical protein.
     
 0.617
glyS
TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: cak:Caul_2175 glycyl-tRNA synthetase subunit beta.
       0.521
glyQ
TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: pzu:PHZ_c1364 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit.
       0.521
ADU11782.1
PFAM: aminoglycoside phosphotransferase; KEGG: cak:Caul_4850 aminoglycoside phosphotransferase.
  
   
 0.500
ADU13025.1
PFAM: glycoside hydrolase family 3 domain protein; KEGG: cak:Caul_3122 beta-N-acetylhexosaminidase.
 
   
 0.493
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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