STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU14852.1Xylan 1,4-beta-xylosidase; KEGG: ccs:CCNA_02442 beta-xylosidase; PFAM: glycoside hydrolase family 39. (525 aa)    
Predicted Functional Partners:
uxaC
KEGG: pzu:PHZ_c2452 glucuronate isomerase; PFAM: Glucuronate isomerase.
     
  0.800
ADU14239.1
Beta-glucuronidase; KEGG: ote:Oter_3352 beta-glucuronidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; Belongs to the glycosyl hydrolase 2 family.
     
  0.800
ADU15139.1
PFAM: glycoside hydrolase clan GH-D; KEGG: hypothetical protein.
  
     0.746
ADU14853.1
PFAM: Carboxylesterase type B; KEGG: sus:Acid_2106 carboxylesterase, type B; Belongs to the type-B carboxylesterase/lipase family.
       0.718
ADU14854.1
Beta-galactosidase; KEGG: aca:ACP_0909 beta-galactosidase family protein; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein.
 
     0.718
ADU13579.1
KEGG: cak:Caul_1302 glycoside hydrolase family alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); SMART: glycoside hydrolase family 29 (alpha-L-fucosidase).
  
     0.717
ADU14845.1
Alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: cak:Caul_1541 alpha-L-fucosidase; SMART: glycoside hydrolase family 29 (alpha-L-fucosidase).
  
     0.661
ADU12328.1
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: cak:Caul_1844 glycoside hydrolase family protein; SMART: glycoside hydrolase family 10.
  
  
 0.642
ADU14954.1
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10.
  
  
 0.626
ADU12290.1
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: cak:Caul_1021 endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10.
  
  
 0.621
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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