STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU15028.1KEGG: sil:SPOA0261 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH. (219 aa)    
Predicted Functional Partners:
ADU13460.1
KEGG: ccs:CCNA_03244 transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: GntR domain protein; regulatory protein GntR HTH.
  
     0.751
ADU13081.1
KEGG: GntR domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: GntR domain protein; regulatory protein GntR HTH.
  
  
 0.699
ADU12090.1
GntR domain protein; KEGG: ccs:CCNA_01487 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
  
 0.692
ADU13667.1
GntR domain protein; KEGG: ccs:CCNA_01487 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
  
 0.692
ADU14971.1
GntR domain protein; KEGG: ccs:CCNA_02904 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR domain protein.
  
  
 0.680
ADU15029.1
4-hydroxyproline epimerase; KEGG: bmr:BMI_I1809 proline racemase, putative; PFAM: proline racemase; Belongs to the proline racemase family.
 
     0.656
ADU15027.1
PFAM: PHP domain protein; KEGG: pzu:PHZ_c2314 hypothetical protein.
       0.584
ADU14851.1
GntR domain protein; KEGG: ccs:CCNA_00824 galactonate operon transcriptional repressor; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: GntR domain protein.
  
  
 0.549
ADU15031.1
PFAM: FAD dependent oxidoreductase; KEGG: smd:Smed_3864 D-amino-acid dehydrogenase.
 
    0.515
ADU15026.1
PFAM: thiol-disulphide oxidoreductase DCC; KEGG: hypothetical protein.
       0.478
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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