STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU15079.1PFAM: regulatory protein TetR; KEGG: met:M446_1098 TetR family transcriptional regulator. (227 aa)    
Predicted Functional Partners:
ADU13133.1
PFAM: regulatory protein TetR; KEGG: cak:Caul_3185 TetR family transcriptional regulator.
  
     0.673
ADU13997.1
PFAM: regulatory protein TetR; KEGG: rru:Rru_A2444 TetR family transcriptional regulator.
  
     0.642
ADU15078.1
PFAM: protein of unknown function zinc metallopeptidase; KEGG: hne:HNE_2884 putative neutral zinc metallopeptidase.
       0.568
ADU15080.1
KEGG: cak:Caul_1281 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.551
ADU15081.1
PFAM: acriflavin resistance protein; KEGG: sal:Sala_0472 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.551
ADU15082.1
Hypothetical protein; KEGG: bph:Bphy_6215 2-hydroxy-3-oxopropionate reductase.
       0.549
ADU12245.1
GAF sensor signal transduction histidine kinase; KEGG: cti:RALTA_B0396 putative senson histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Serine/threonine-protein kinase-like domain; GAF domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein.
  
 
 
 0.497
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
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