STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU15153.1PFAM: lipolytic protein G-D-S-L family; KEGG: mlo:mlr4086 putative secreted protein. (419 aa)    
Predicted Functional Partners:
ADU14240.1
KEGG: ccs:CCNA_00578 hypothetical protein.
 
 
   0.644
ADU12066.1
KEGG: hypothetical protein.
 
 
 0.606
ADU12328.1
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: cak:Caul_1844 glycoside hydrolase family protein; SMART: glycoside hydrolase family 10.
  
     0.569
ADU12290.1
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: cak:Caul_1021 endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10.
  
     0.533
ADU13049.1
KEGG: scb:SCAB_43081 hypothetical protein.
  
     0.523
ADU13816.1
KEGG: beta-galactosidase; PFAM: glycoside hydrolase family 35; Beta-galactosidase, domain 2; glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 35 family.
  
    0.463
ADU14954.1
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10.
  
     0.454
ADU14698.1
PFAM: glycoside hydrolase family 9; KEGG: ccs:CCNA_02310 cellulose 1,4-beta-cellobiosidase.
 
 
 0.423
ADU14973.1
Alpha-glucuronidase; KEGG: sjp:SJA_C2-03470 alpha-glucuronidase; PFAM: Glycosyl hydrolase 67 middle domain protein; glycosyl hydrolase 67 C-teriminal domain protein; Belongs to the glycosyl hydrolase 67 family.
 
     0.410
Your Current Organism:
Asticcacaulis excentricus
NCBI taxonomy Id: 573065
Other names: A. excentricus CB 48, Asticcacaulis excentricus ATCC 15261, Asticcacaulis excentricus CB 48, Asticcacaulis excentricus DSM 4724, Asticcacaulis excentricus str. CB 48, Asticcacaulis excentricus strain CB 48
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.