Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK37824.1 | SEK69457.1 | SAMN04488505_10182 | SAMN04488505_101712 | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Transglutaminase-like superfamily protein. | 0.953 |
SEK37824.1 | SEK72835.1 | SAMN04488505_10182 | SAMN04488505_101778 | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | PAS domain S-box-containing protein. | 0.474 |
SEK37824.1 | SEK80299.1 | SAMN04488505_10182 | SAMN04488505_101916 | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Glutamate synthase (NADH) large subunit. | 0.923 |
SEK37824.1 | SEM39484.1 | SAMN04488505_10182 | SAMN04488505_104266 | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Signal transduction histidine kinase. | 0.474 |
SEK37824.1 | SEM59643.1 | SAMN04488505_10182 | SAMN04488505_105141 | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | PAS domain S-box-containing protein. | 0.474 |
SEK37824.1 | SEM80141.1 | SAMN04488505_10182 | SAMN04488505_106186 | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | 0.447 |
SEK37824.1 | SEM80176.1 | SAMN04488505_10182 | SAMN04488505_106187 | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 2-oxoglutarate dehydrogenase E1 component. | 0.999 |
SEK69457.1 | SEK37824.1 | SAMN04488505_101712 | SAMN04488505_10182 | Transglutaminase-like superfamily protein. | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.953 |
SEK69457.1 | SEK72835.1 | SAMN04488505_101712 | SAMN04488505_101778 | Transglutaminase-like superfamily protein. | PAS domain S-box-containing protein. | 0.919 |
SEK69457.1 | SEK80299.1 | SAMN04488505_101712 | SAMN04488505_101916 | Transglutaminase-like superfamily protein. | Glutamate synthase (NADH) large subunit. | 0.952 |
SEK69457.1 | SEL98600.1 | SAMN04488505_101712 | SAMN04488505_10361 | Transglutaminase-like superfamily protein. | PASTA domain-containing protein. | 0.967 |
SEK69457.1 | SEM09017.1 | SAMN04488505_101712 | SAMN04488505_103344 | Transglutaminase-like superfamily protein. | 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase). | 0.953 |
SEK69457.1 | SEM39484.1 | SAMN04488505_101712 | SAMN04488505_104266 | Transglutaminase-like superfamily protein. | Signal transduction histidine kinase. | 0.918 |
SEK69457.1 | SEM59643.1 | SAMN04488505_101712 | SAMN04488505_105141 | Transglutaminase-like superfamily protein. | PAS domain S-box-containing protein. | 0.918 |
SEK69457.1 | SEM80141.1 | SAMN04488505_101712 | SAMN04488505_106186 | Transglutaminase-like superfamily protein. | 2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | 0.953 |
SEK69457.1 | SEM80176.1 | SAMN04488505_101712 | SAMN04488505_106187 | Transglutaminase-like superfamily protein. | 2-oxoglutarate dehydrogenase E1 component. | 0.968 |
SEK69457.1 | SEN89267.1 | SAMN04488505_101712 | SAMN04488505_11462 | Transglutaminase-like superfamily protein. | Hypothetical protein. | 0.930 |
SEK72835.1 | SEK37824.1 | SAMN04488505_101778 | SAMN04488505_10182 | PAS domain S-box-containing protein. | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.474 |
SEK72835.1 | SEK69457.1 | SAMN04488505_101778 | SAMN04488505_101712 | PAS domain S-box-containing protein. | Transglutaminase-like superfamily protein. | 0.919 |
SEK72835.1 | SEK80299.1 | SAMN04488505_101778 | SAMN04488505_101916 | PAS domain S-box-containing protein. | Glutamate synthase (NADH) large subunit. | 0.502 |
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