STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL44349.1Glycosyltransferase, MGT family; Belongs to the UDP-glycosyltransferase family. (398 aa)    
Predicted Functional Partners:
SEL44517.1
Acyl transferase domain-containing protein; Belongs to the P-Pant transferase superfamily.
 
    0.915
SEL44465.1
Acyl carrier protein.
 
     0.904
SEL44310.1
Uncharacterized protein, contains a NRPS condensation (elongation) domain.
 
 
  0.901
SEL44557.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
 
  
 0.900
SEL44266.1
Condensation domain-containing protein.
 
 
  0.874
SEL44426.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
    0.853
SEK51518.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
 
  0.721
SEL54656.1
Hypothetical protein.
  
 0.715
SEN56949.1
Hypothetical protein.
  
 0.715
SEM77768.1
Amino acid adenylation domain-containing protein.
 
 
 0.678
Your Current Organism:
Chitinophaga rupis
NCBI taxonomy Id: 573321
Other names: C. rupis, Chitinophaga rupis Lee et al. 2009, Chitinophaga sp. CS5-B1, DSM 21039, KCTC 22170, strain CS5-B1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.