Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEK48135.1 | SEM55247.1 | SAMN04488505_101278 | SAMN04488505_10518 | Predicted dehydrogenase. | Sugar phosphate isomerase/epimerase. | 0.588 |
SEK48135.1 | SEN31162.1 | SAMN04488505_101278 | SAMN04488505_109204 | Predicted dehydrogenase. | Gluconate 2-dehydrogenase subunit 3. | 0.486 |
SEK48135.1 | SEN88186.1 | SAMN04488505_101278 | SAMN04488505_11434 | Predicted dehydrogenase. | Gluconate 2-dehydrogenase subunit 3. | 0.457 |
SEK78347.1 | SEK84435.1 | SAMN04488505_101880 | SAMN04488505_101994 | Hydroxypyruvate isomerase. | Oxidoreductase family, NAD-binding Rossmann fold. | 0.513 |
SEK78347.1 | SEM55247.1 | SAMN04488505_101880 | SAMN04488505_10518 | Hydroxypyruvate isomerase. | Sugar phosphate isomerase/epimerase. | 0.561 |
SEK78347.1 | SEN31162.1 | SAMN04488505_101880 | SAMN04488505_109204 | Hydroxypyruvate isomerase. | Gluconate 2-dehydrogenase subunit 3. | 0.653 |
SEK78347.1 | SEN88186.1 | SAMN04488505_101880 | SAMN04488505_11434 | Hydroxypyruvate isomerase. | Gluconate 2-dehydrogenase subunit 3. | 0.421 |
SEK84223.1 | SEL66044.1 | SAMN04488505_101991 | SAMN04488505_102786 | Predicted dehydrogenase. | Predicted dehydrogenase. | 0.634 |
SEK84223.1 | SEM55247.1 | SAMN04488505_101991 | SAMN04488505_10518 | Predicted dehydrogenase. | Sugar phosphate isomerase/epimerase. | 0.488 |
SEK84435.1 | SEK78347.1 | SAMN04488505_101994 | SAMN04488505_101880 | Oxidoreductase family, NAD-binding Rossmann fold. | Hydroxypyruvate isomerase. | 0.513 |
SEK84435.1 | SEM55247.1 | SAMN04488505_101994 | SAMN04488505_10518 | Oxidoreductase family, NAD-binding Rossmann fold. | Sugar phosphate isomerase/epimerase. | 0.528 |
SEL48693.1 | SEM55247.1 | SAMN04488505_102381 | SAMN04488505_10518 | Predicted dehydrogenase. | Sugar phosphate isomerase/epimerase. | 0.574 |
SEL66044.1 | SEK84223.1 | SAMN04488505_102786 | SAMN04488505_101991 | Predicted dehydrogenase. | Predicted dehydrogenase. | 0.634 |
SEL66044.1 | SEM55247.1 | SAMN04488505_102786 | SAMN04488505_10518 | Predicted dehydrogenase. | Sugar phosphate isomerase/epimerase. | 0.550 |
SEM55247.1 | SEK48135.1 | SAMN04488505_10518 | SAMN04488505_101278 | Sugar phosphate isomerase/epimerase. | Predicted dehydrogenase. | 0.588 |
SEM55247.1 | SEK78347.1 | SAMN04488505_10518 | SAMN04488505_101880 | Sugar phosphate isomerase/epimerase. | Hydroxypyruvate isomerase. | 0.561 |
SEM55247.1 | SEK84223.1 | SAMN04488505_10518 | SAMN04488505_101991 | Sugar phosphate isomerase/epimerase. | Predicted dehydrogenase. | 0.488 |
SEM55247.1 | SEK84435.1 | SAMN04488505_10518 | SAMN04488505_101994 | Sugar phosphate isomerase/epimerase. | Oxidoreductase family, NAD-binding Rossmann fold. | 0.528 |
SEM55247.1 | SEL48693.1 | SAMN04488505_10518 | SAMN04488505_102381 | Sugar phosphate isomerase/epimerase. | Predicted dehydrogenase. | 0.574 |
SEM55247.1 | SEL66044.1 | SAMN04488505_10518 | SAMN04488505_102786 | Sugar phosphate isomerase/epimerase. | Predicted dehydrogenase. | 0.550 |
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