Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DMR_01930 | DMR_01940 | DMR_01930 | DMR_01940 | Methyl-viologen-reducing hydrogenase delta subunit family protein. | Iron-sulfur binding protein. | 0.998 |
DMR_01930 | DMR_01950 | DMR_01930 | DMR_01950 | Methyl-viologen-reducing hydrogenase delta subunit family protein. | Iron-sulfur binding protein. | 0.957 |
DMR_01930 | DMR_01960 | DMR_01930 | DMR_01960 | Methyl-viologen-reducing hydrogenase delta subunit family protein. | Putative oxidoreductase. | 0.992 |
DMR_01930 | DMR_01970 | DMR_01930 | DMR_01970 | Methyl-viologen-reducing hydrogenase delta subunit family protein. | Hypothetical protein. | 0.946 |
DMR_01930 | hdrA | DMR_01930 | DMR_01920 | Methyl-viologen-reducing hydrogenase delta subunit family protein. | Heterodisulfide reductase subunit A. | 0.999 |
DMR_01930 | hdrB | DMR_01930 | DMR_01910 | Methyl-viologen-reducing hydrogenase delta subunit family protein. | Heterodisulfide reductase subunit B. | 0.999 |
DMR_01930 | hdrC | DMR_01930 | DMR_01900 | Methyl-viologen-reducing hydrogenase delta subunit family protein. | Heterodisulfide reductase subunit C. | 0.998 |
DMR_01930 | phaA | DMR_01930 | DMR_08220 | Methyl-viologen-reducing hydrogenase delta subunit family protein. | Putative thiosulfate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.617 |
DMR_01940 | DMR_01930 | DMR_01940 | DMR_01930 | Iron-sulfur binding protein. | Methyl-viologen-reducing hydrogenase delta subunit family protein. | 0.998 |
DMR_01940 | DMR_01950 | DMR_01940 | DMR_01950 | Iron-sulfur binding protein. | Iron-sulfur binding protein. | 0.957 |
DMR_01940 | DMR_01960 | DMR_01940 | DMR_01960 | Iron-sulfur binding protein. | Putative oxidoreductase. | 0.993 |
DMR_01940 | DMR_01970 | DMR_01940 | DMR_01970 | Iron-sulfur binding protein. | Hypothetical protein. | 0.967 |
DMR_01940 | hdrA | DMR_01940 | DMR_01920 | Iron-sulfur binding protein. | Heterodisulfide reductase subunit A. | 0.999 |
DMR_01940 | hdrB | DMR_01940 | DMR_01910 | Iron-sulfur binding protein. | Heterodisulfide reductase subunit B. | 0.999 |
DMR_01940 | hdrC | DMR_01940 | DMR_01900 | Iron-sulfur binding protein. | Heterodisulfide reductase subunit C. | 0.998 |
DMR_01940 | phaA | DMR_01940 | DMR_08220 | Iron-sulfur binding protein. | Putative thiosulfate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.617 |
DMR_01950 | DMR_01930 | DMR_01950 | DMR_01930 | Iron-sulfur binding protein. | Methyl-viologen-reducing hydrogenase delta subunit family protein. | 0.957 |
DMR_01950 | DMR_01940 | DMR_01950 | DMR_01940 | Iron-sulfur binding protein. | Iron-sulfur binding protein. | 0.957 |
DMR_01950 | DMR_01960 | DMR_01950 | DMR_01960 | Iron-sulfur binding protein. | Putative oxidoreductase. | 0.999 |
DMR_01950 | DMR_01970 | DMR_01950 | DMR_01970 | Iron-sulfur binding protein. | Hypothetical protein. | 0.928 |
page 1 of 5