Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DMR_03460Putative ABC transporter substrate binding protein. (420 aa)    
Predicted Functional Partners:
DMR_11360
ABC transporter ATP-binding protein.
 
  
 0.864
DMR_45590
Branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.807
DMR_03470
GGDEF domain protein.
 
     0.803
DMR_22430
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.803
DMR_22440
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.797
DMR_12090
ABC transporter ATP-binding protein.
 
  
 0.780
DMR_12080
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.769
DMR_05810
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.766
DMR_05870
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.765
DMR_22420
ABC transporter ATP-binding protein.
 
  
 0.764
Your Current Organism:
Desulfovibrio magneticus RS1
NCBI taxonomy Id: 573370
Other names: D. magneticus RS-1, Desulfovibrio magneticus 700980, Desulfovibrio magneticus RS-1, Desulfovibrio magneticus str. RS-1, Desulfovibrio magneticus strain RS-1
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