STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DMR_05870ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (297 aa)    
Predicted Functional Partners:
DMR_05880
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
DMR_05860
ABC transporter substrate binding protein precursor.
 
 
 0.994
DMR_05810
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.988
DMR_05890
ABC transporter ATP-binding protein.
 
  
 0.975
DMR_05790
ABC transporter substrate binding protein precursor.
 
 
 0.973
DMR_05900
ABC transporter ATP-binding protein.
 
  
 0.969
DMR_11360
ABC transporter ATP-binding protein.
 
  
 0.953
DMR_05800
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.914
DMR_11370
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.913
DMR_22430
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.900
Your Current Organism:
Desulfovibrio magneticus RS1
NCBI taxonomy Id: 573370
Other names: D. magneticus RS-1, Desulfovibrio magneticus 700980, Desulfovibrio magneticus RS-1, Desulfovibrio magneticus str. RS-1, Desulfovibrio magneticus strain RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.