STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DMR_11390ABC transporter substrate binding protein precursor. (379 aa)    
Predicted Functional Partners:
DMR_11380
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.973
DMR_11370
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.971
DMR_11360
ABC transporter ATP-binding protein.
 
  
 0.961
DMR_38950
Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.828
DMR_09070
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.796
DMR_11350
ABC transporter ATP-binding protein.
 
  
 0.795
DMR_38960
Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.782
DMR_09060
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.778
DMR_22660
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.719
DMR_22430
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.714
Your Current Organism:
Desulfovibrio magneticus RS1
NCBI taxonomy Id: 573370
Other names: D. magneticus RS-1, Desulfovibrio magneticus 700980, Desulfovibrio magneticus RS-1, Desulfovibrio magneticus str. RS-1, Desulfovibrio magneticus strain RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.