Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DMR_17820 | DMR_19980 | DMR_17820 | DMR_19980 | Hypothetical protein. | Hypothetical protein. | 0.789 |
DMR_17820 | DMR_25970 | DMR_17820 | DMR_25970 | Hypothetical protein. | Hypothetical protein. | 0.432 |
DMR_17820 | DMR_28440 | DMR_17820 | DMR_28440 | Hypothetical protein. | Hypothetical protein. | 0.917 |
DMR_17820 | DMR_34350 | DMR_17820 | DMR_34350 | Hypothetical protein. | Hypothetical protein. | 0.752 |
DMR_17820 | alaS | DMR_17820 | DMR_43290 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.907 |
DMR_17820 | rpoZ | DMR_17820 | DMR_19960 | Hypothetical protein. | DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.744 |
DMR_19980 | DMR_17820 | DMR_19980 | DMR_17820 | Hypothetical protein. | Hypothetical protein. | 0.789 |
DMR_19980 | DMR_25970 | DMR_19980 | DMR_25970 | Hypothetical protein. | Hypothetical protein. | 0.743 |
DMR_19980 | DMR_28440 | DMR_19980 | DMR_28440 | Hypothetical protein. | Hypothetical protein. | 0.841 |
DMR_19980 | DMR_29730 | DMR_19980 | DMR_29730 | Hypothetical protein. | Heat shock protein Hsp70 family protein. | 0.749 |
DMR_19980 | DMR_34350 | DMR_19980 | DMR_34350 | Hypothetical protein. | Hypothetical protein. | 0.768 |
DMR_19980 | alaS | DMR_19980 | DMR_43290 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.745 |
DMR_19980 | dnaJ | DMR_19980 | DMR_19970 | Hypothetical protein. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.862 |
DMR_19980 | htpG | DMR_19980 | DMR_11440 | Hypothetical protein. | Chaperone protein HtpG; Molecular chaperone. Has ATPase activity. | 0.772 |
DMR_19980 | moaC | DMR_19980 | DMR_19990 | Hypothetical protein. | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.776 |
DMR_19980 | rpoZ | DMR_19980 | DMR_19960 | Hypothetical protein. | DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.924 |
DMR_25970 | DMR_17820 | DMR_25970 | DMR_17820 | Hypothetical protein. | Hypothetical protein. | 0.432 |
DMR_25970 | DMR_19980 | DMR_25970 | DMR_19980 | Hypothetical protein. | Hypothetical protein. | 0.743 |
DMR_25970 | DMR_28440 | DMR_25970 | DMR_28440 | Hypothetical protein. | Hypothetical protein. | 0.931 |
DMR_25970 | DMR_34350 | DMR_25970 | DMR_34350 | Hypothetical protein. | Hypothetical protein. | 0.790 |
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