Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DMR_01570 | DMR_23840 | DMR_01570 | DMR_23840 | Putative non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | Hypothetical protein; Belongs to the TtcA family. | 0.722 |
DMR_01570 | dnaA | DMR_01570 | DMR_00010 | Putative non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | 0.964 |
DMR_02290 | DMR_23840 | DMR_02290 | DMR_23840 | Hypothetical protein. | Hypothetical protein; Belongs to the TtcA family. | 0.659 |
DMR_23830 | DMR_23840 | DMR_23830 | DMR_23840 | Hypothetical protein. | Hypothetical protein; Belongs to the TtcA family. | 0.752 |
DMR_23830 | DMR_23850 | DMR_23830 | DMR_23850 | Hypothetical protein. | Peptidase M23B family protein. | 0.746 |
DMR_23830 | cheD | DMR_23830 | DMR_23820 | Hypothetical protein. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.811 |
DMR_23830 | flhB | DMR_23830 | DMR_23870 | Hypothetical protein. | Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. | 0.606 |
DMR_23830 | fliR | DMR_23830 | DMR_23860 | Hypothetical protein. | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | 0.640 |
DMR_23840 | DMR_01570 | DMR_23840 | DMR_01570 | Hypothetical protein; Belongs to the TtcA family. | Putative non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.722 |
DMR_23840 | DMR_02290 | DMR_23840 | DMR_02290 | Hypothetical protein; Belongs to the TtcA family. | Hypothetical protein. | 0.659 |
DMR_23840 | DMR_23830 | DMR_23840 | DMR_23830 | Hypothetical protein; Belongs to the TtcA family. | Hypothetical protein. | 0.752 |
DMR_23840 | DMR_23850 | DMR_23840 | DMR_23850 | Hypothetical protein; Belongs to the TtcA family. | Peptidase M23B family protein. | 0.815 |
DMR_23840 | DMR_30610 | DMR_23840 | DMR_30610 | Hypothetical protein; Belongs to the TtcA family. | Hypothetical protein. | 0.778 |
DMR_23840 | cheD | DMR_23840 | DMR_23820 | Hypothetical protein; Belongs to the TtcA family. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.752 |
DMR_23840 | dnaA | DMR_23840 | DMR_00010 | Hypothetical protein; Belongs to the TtcA family. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | 0.651 |
DMR_23840 | flhB | DMR_23840 | DMR_23870 | Hypothetical protein; Belongs to the TtcA family. | Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. | 0.646 |
DMR_23840 | fliR | DMR_23840 | DMR_23860 | Hypothetical protein; Belongs to the TtcA family. | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | 0.763 |
DMR_23840 | pth | DMR_23840 | DMR_29450 | Hypothetical protein; Belongs to the TtcA family. | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.651 |
DMR_23850 | DMR_23830 | DMR_23850 | DMR_23830 | Peptidase M23B family protein. | Hypothetical protein. | 0.746 |
DMR_23850 | DMR_23840 | DMR_23850 | DMR_23840 | Peptidase M23B family protein. | Hypothetical protein; Belongs to the TtcA family. | 0.815 |
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