Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DMR_02440 | DMR_03440 | DMR_02440 | DMR_03440 | Putative glycosyltransferase. | Hypothetical protein. | 0.653 |
DMR_02440 | DMR_26180 | DMR_02440 | DMR_26180 | Putative glycosyltransferase. | Putative glycosyltransferase. | 0.662 |
DMR_02440 | DMR_27920 | DMR_02440 | DMR_27920 | Putative glycosyltransferase. | Putative drug resistance transporter; Belongs to the major facilitator superfamily. | 0.753 |
DMR_02440 | DMR_31080 | DMR_02440 | DMR_31080 | Putative glycosyltransferase. | Hypothetical protein. | 0.550 |
DMR_02440 | dnaA | DMR_02440 | DMR_00010 | Putative glycosyltransferase. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | 0.948 |
DMR_03440 | DMR_02440 | DMR_03440 | DMR_02440 | Hypothetical protein. | Putative glycosyltransferase. | 0.653 |
DMR_03440 | DMR_27920 | DMR_03440 | DMR_27920 | Hypothetical protein. | Putative drug resistance transporter; Belongs to the major facilitator superfamily. | 0.671 |
DMR_03440 | dnaA | DMR_03440 | DMR_00010 | Hypothetical protein. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | 0.626 |
DMR_04000 | DMR_27920 | DMR_04000 | DMR_27920 | Hypothetical protein. | Putative drug resistance transporter; Belongs to the major facilitator superfamily. | 0.655 |
DMR_08320 | DMR_27920 | DMR_08320 | DMR_27920 | Efflux system protein. | Putative drug resistance transporter; Belongs to the major facilitator superfamily. | 0.874 |
DMR_08360 | DMR_27920 | DMR_08360 | DMR_27920 | Hypothetical protein. | Putative drug resistance transporter; Belongs to the major facilitator superfamily. | 0.655 |
DMR_15700 | DMR_27920 | DMR_15700 | DMR_27920 | Methionine biosynthesis MetW family protein. | Putative drug resistance transporter; Belongs to the major facilitator superfamily. | 0.655 |
DMR_20190 | DMR_27920 | DMR_20190 | DMR_27920 | Hypothetical protein. | Putative drug resistance transporter; Belongs to the major facilitator superfamily. | 0.655 |
DMR_26180 | DMR_02440 | DMR_26180 | DMR_02440 | Putative glycosyltransferase. | Putative glycosyltransferase. | 0.662 |
DMR_26180 | DMR_27920 | DMR_26180 | DMR_27920 | Putative glycosyltransferase. | Putative drug resistance transporter; Belongs to the major facilitator superfamily. | 0.668 |
DMR_26180 | dnaA | DMR_26180 | DMR_00010 | Putative glycosyltransferase. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | 0.808 |
DMR_27920 | DMR_02440 | DMR_27920 | DMR_02440 | Putative drug resistance transporter; Belongs to the major facilitator superfamily. | Putative glycosyltransferase. | 0.753 |
DMR_27920 | DMR_03440 | DMR_27920 | DMR_03440 | Putative drug resistance transporter; Belongs to the major facilitator superfamily. | Hypothetical protein. | 0.671 |
DMR_27920 | DMR_04000 | DMR_27920 | DMR_04000 | Putative drug resistance transporter; Belongs to the major facilitator superfamily. | Hypothetical protein. | 0.655 |
DMR_27920 | DMR_08320 | DMR_27920 | DMR_08320 | Putative drug resistance transporter; Belongs to the major facilitator superfamily. | Efflux system protein. | 0.874 |
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