Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DMR_13870 | DMR_14830 | DMR_13870 | DMR_14830 | Hypothetical protein. | Hypothetical protein. | 0.983 |
DMR_13870 | DMR_17760 | DMR_13870 | DMR_17760 | Hypothetical protein. | Putative sensor histidine kinase. | 0.939 |
DMR_13870 | DMR_25970 | DMR_13870 | DMR_25970 | Hypothetical protein. | Hypothetical protein. | 0.697 |
DMR_13870 | DMR_26270 | DMR_13870 | DMR_26270 | Hypothetical protein. | Two-component hybrid sensor and regulator. | 0.939 |
DMR_13870 | DMR_28440 | DMR_13870 | DMR_28440 | Hypothetical protein. | Hypothetical protein. | 0.983 |
DMR_13870 | DMR_29730 | DMR_13870 | DMR_29730 | Hypothetical protein. | Heat shock protein Hsp70 family protein. | 0.721 |
DMR_13870 | DMR_36600 | DMR_13870 | DMR_36600 | Hypothetical protein. | Putative chemotaxis CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.939 |
DMR_13870 | dnaK | DMR_13870 | DMR_17370 | Hypothetical protein. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.721 |
DMR_13870 | glpK | DMR_13870 | DMR_27730 | Hypothetical protein. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.548 |
DMR_14830 | DMR_13870 | DMR_14830 | DMR_13870 | Hypothetical protein. | Hypothetical protein. | 0.983 |
DMR_14830 | DMR_17760 | DMR_14830 | DMR_17760 | Hypothetical protein. | Putative sensor histidine kinase. | 0.930 |
DMR_14830 | DMR_25970 | DMR_14830 | DMR_25970 | Hypothetical protein. | Hypothetical protein. | 0.922 |
DMR_14830 | DMR_26270 | DMR_14830 | DMR_26270 | Hypothetical protein. | Two-component hybrid sensor and regulator. | 0.930 |
DMR_14830 | DMR_28440 | DMR_14830 | DMR_28440 | Hypothetical protein. | Hypothetical protein. | 0.938 |
DMR_14830 | DMR_29730 | DMR_14830 | DMR_29730 | Hypothetical protein. | Heat shock protein Hsp70 family protein. | 0.930 |
DMR_14830 | DMR_36600 | DMR_14830 | DMR_36600 | Hypothetical protein. | Putative chemotaxis CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.930 |
DMR_14830 | alaS | DMR_14830 | DMR_43290 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.947 |
DMR_14830 | dnaK | DMR_14830 | DMR_17370 | Hypothetical protein. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.930 |
DMR_14830 | glpK | DMR_14830 | DMR_27730 | Hypothetical protein. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.940 |
DMR_17760 | DMR_13870 | DMR_17760 | DMR_13870 | Putative sensor histidine kinase. | Hypothetical protein. | 0.939 |
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