STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DMR_32220Hypothetical protein. (250 aa)    
Predicted Functional Partners:
DMR_09170
Hypothetical protein.
  
     0.731
DMR_18480
Hypothetical protein.
  
    0.557
DMR_11300
Hypothetical protein.
  
     0.538
DMR_14630
Type II restriction enzyme; Recognizes the double-stranded sequence CTCGAG and cleaves after C-1; Belongs to the type II restriction enzyme XhoI family.
  
     0.520
DMR_14640
Modification methylase.
  
     0.509
DMR_36570
Putative transposase; Fragment.
  
     0.501
DMR_32210
Hypothetical protein.
       0.479
DMR_09160
Hypothetical protein.
  
     0.455
DMR_40700
Putative transposase orfB.
  
     0.419
Your Current Organism:
Desulfovibrio magneticus RS1
NCBI taxonomy Id: 573370
Other names: D. magneticus RS-1, Desulfovibrio magneticus 700980, Desulfovibrio magneticus RS-1, Desulfovibrio magneticus str. RS-1, Desulfovibrio magneticus strain RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.